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For the 2025-26 school year, there are 5 public schools serving 2,015 students in Waupaca, WI (there are , serving 216 private students). 90% of all K-12 students in Waupaca, WI are educated in public schools (compared to the WI state average of 85%).

The top ranked public schools in Waupaca, WI are Chain Exploration Center, Waupaca Learning Center Elementary School and Waupaca Middle School. Overall testing rank is based on a school's combined math and reading proficiency test score ranking.

Waupaca, WI public schools have an average math proficiency score of 48% (versus the Wisconsin public school average of 40%), and reading proficiency score of 44% (versus the 38% statewide average). Schools in Waupaca have an average ranking of 7/10, which is in the top 50% of Wisconsin public schools.

Minority enrollment is 12% of the student body (majority Hispanic), which is less than the Wisconsin public school average of 34% (majority Hispanic and Black).